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Role of protein frame and solvent for the redox properties of azurin from Pseudomonas aeruginosa

Cascella, M.
•
Magistrato, A.
•
Tavernelli, I.
altro
Rothlisberger, U.
2006
  • journal article

Periodico
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Abstract
We have coupled hybrid quantum mechanics (density functional theory; Car-Parrinello)/molecular mechanics molecular dynamics simulations to a grand-canonical scheme, to calculate the in situ redox potential of the Cu2+ + e(-) -> Cu+ half reaction in azurin from Pseudomonas aeruginosa. An accurate description at atomistic level of the environment surrounding the metal-binding site and finite-temperature fluctuations of the protein structure are both essential for a correct quantitative description of the electronic properties of this system. We report a redox potential shift with respect to copper in water of 0.2 eV (experimental 0.16 eV) and a reorganization free energy lambda = 0.76 eV (experimental 0.6-0.8 eV). The electrostatic field of the protein plays a crucial role in fine tuning the redox potential and determining the structure of the solvent. The inner-sphere contribution to the reorganization energy is negligible. The overall small value is mainly due to solvent rearrangement at the protein surface.
DOI
10.1073/pnas.0607890103
WOS
WOS:000243285500008
Archivio
http://hdl.handle.net/20.500.11767/32251
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-33845935792
Diritti
closed access
Soggetti
  • density functional th...

  • electron transfer

  • molecular dynamic

  • reorganization energy...

  • Settore CHIM/03 - Chi...

Scopus© citazioni
129
Data di acquisizione
Jun 7, 2022
Vedi dettagli
Web of Science© citazioni
135
Data di acquisizione
Mar 28, 2024
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