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Role of secondary motifs in fast folding polymers: A dynamical variational principle

MARITAN A
•
BANAVAR JR
•
Micheletti, Cristian
2000
  • journal article

Periodico
PHYSICAL REVIEW LETTERS
Abstract
A fascinating and open question challenging biochemistry, physics, and even geometry is the presence of highly regular motifs such as a helices in the folded state of biopolymers and proteins. Stimulating explanations ranging from chemical propensity to simple geometrical reasoning have been invoked to rationalize the existence of such secondary structures. We formulate a dynamical variational principle for selection in conformation space based on the requirement that the backbone of the native state of biologically viable polymers be rapidly accessible from the denatured state. The variational principle is shown to result in the emergence of helical order in compact structures.
DOI
10.1103/PhysRevLett.84.3009
WOS
WOS:000086062000061
Archivio
http://hdl.handle.net/20.500.11767/13306
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-0034719580
Diritti
closed access
Web of Science© citazioni
34
Data di acquisizione
Mar 25, 2024
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