BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
Abstract
The solution structure of human b2-microglobulin (b2-m) was determined by 1H NMR spectroscopy and restrained modeling calculations.
Compared to the crystal structure of type I major histocompatibility complex (MHC-I), where the protein is associated to the heavy-chain
component, several differences are observed, i.e., increased separation between strands A and B, displacements of strand CV and loop DE,
shortening of strands D and E. These modifications can be considered as the prodromes of the amyloid transition. Even minor charge changes
in response to pH, as is the case with H31 imidazole protonation, trigger the transition that starts with unpairing of strand A. The same
mechanism accounts for the partial unfolding and fiber formation subsequent to Cu2+ binding which is shown to occur primarily at H31.
Solvation of the protected regions in MHC-I decreases the tertiary packing by breaking the contiguity of the surface hydrophobic patches via
surface charge cluster. Mutants or truncated forms of h2-m can be designed to remove the instability from H31 titration or to enhance the
instability through surface charge suppression. By monitoring the conformational evolution of wild-type protein and variants thereof, either
in response or absence of external perturbation, valuable insights into intermediate structure and fibrillogenesis mechanisms are gained.