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A simple asynchronous replica-exchange implementation

Bussi, G.
2009
  • journal article

Periodico
IL NUOVO CIMENTO C
Abstract
We discuss the possibility of implementing asynchronous replica-exchange (or parallel tempering) molecular dynamics. In our scheme, the exchange attempts are driven by asynchronous messages sent by one of the computing nodes, so that different replicas are allowed to perform a different number, of time, steps between subsequent attempts. The implementation is simple and based on the message-passing interface (MPI). illustrate the advantages of our scheme with respect to the standard synchronous algorithm and we benchmark it for a model Lennard-Jones liquid on an IBM-LS21 blade center cluster.
DOI
10.1393/ncc/i2009-10369-8
WOS
WOS:000273305000015
Archivio
http://hdl.handle.net/20.500.11767/16458
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-72949115755
https://arxiv.org/abs/0812.1633
Diritti
closed access
Soggetti
  • Settore FIS/03 - Fisi...

Web of Science© citazioni
5
Data di acquisizione
Mar 5, 2024
Visualizzazioni
1
Data di acquisizione
Apr 19, 2024
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