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Large scale chromosome folding Is stable against local changes in chromatin structure

Florescu, A. M.
•
Therizols, P.
•
Rosa, A.
2016
  • journal article

Periodico
PLOS COMPUTATIONAL BIOLOGY
Abstract
Characterizing the link between small-scale chromatin structure and large-scale chromosome folding during interphase is a prerequisite for understanding transcription. Yet, this link remains poorly investigated. Here, we introduce a simple biophysical model where interphase chromosomes are described in terms of the folding of chromatin sequences composed of alternating blocks of fibers with different thicknesses and flexibilities, and we use it to study the influence of sequence disorder on chromosome behaviors in space and time. By employing extensive computer simulations, we thus demonstrate that chromosomes undergo noticeable conformational changes only on length-scales smaller than 10(5) basepairs and time-scales shorter than a few seconds, and we suggest there might exist effective upper bounds to the detection of chromosome reorganization in eukaryotes. We prove the relevance of our framework by modeling recent experimental FISH data on murine chromosomes. © 2016 Florescu et al.
DOI
10.1371/journal.pcbi.1004987
WOS
WOS:000379349700055
Archivio
http://hdl.handle.net/20.500.11767/11839
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84978806375
https://arxiv.org/abs/1511.05712
http://cdsads.u-strasbg.fr/abs/2016PLSCB..12E4987F
Diritti
open access
Soggetti
  • OLIGOPAINT FISH PROBE...

  • NUCLEAR ARCHITECTURE

  • GENOME ORGANIZATION

  • MOLECULAR-DYNAMICS

  • IN-VIVO

  • MODEL

  • YEAST

  • CONFORMATION

  • FLEXIBILITY

  • DOMAINS

  • Settore FIS/03 - Fisi...

Scopus© citazioni
13
Data di acquisizione
Jun 2, 2022
Vedi dettagli
Web of Science© citazioni
16
Data di acquisizione
Mar 27, 2024
Visualizzazioni
5
Data di acquisizione
Apr 19, 2024
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