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Characterisation of the pan-genome of Vitis vinifera using Next Generation Sequencing

MAGRIS, Gabriele
2016-04-07
  • doctoral thesis

Abstract
The main objective of the present project is the characterisation of the dispensable portion of Vitis vinifera pan-genome, mostly attributable to Structural Variants (SVs). Single Nucleotide Polymorphism (SNP) markers were used to explore the grapevine population structure and to assess the genetic relationships between individuals. In a subset of 50 varieties, representative of the genetic diversity of the grapevine population, we investigated at genome-wide level the structural variants shaping the V. vinifera pan-genome.
Archivio
http://hdl.handle.net/11390/1132723
http://hdl.handle.net/10990/688
Diritti
open access
Soggetti
  • Vitis vinifera

  • Grapevine

  • Illumina next generat...

  • Structural variation

  • Single nucleotide pol...

  • Transposable element

  • Pan-genome

  • Dispensable genome

  • Settore BIO/18 - Gene...

Visualizzazioni
2
Data di acquisizione
Apr 19, 2024
Vedi dettagli
google-scholar
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