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Structured Motifs Search

MORGANTE, Michele
•
POLICRITI, Alberto
•
VITACOLONNA, Nicola
•
ZUCCOLO, Andrea
2004
  • conference object

Abstract
In this paper we describe an algorithm for the localization of structured models, i.e. sequences of (simple) motifs and distance constraints. It basically combines standard pattern matching procedures with a constraint satisfaction solver, and it has the ability, not present in similar tools, to search for partial matches. A significant feature of our approach, especially in terms of efficiency for the application context, is that the (potentially) exponentially many solutions to the considered problem are represented in compact form as a graph. Moreover, the time and space necessary to build the graph are linear in the number of occurrences of the component patterns.
DOI
10.1145/974614.974632
WOS
WOS:000233288200002
Archivio
http://hdl.handle.net/11390/881947
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-2442464776
Diritti
closed access
Soggetti
  • structured motif

  • string algorithm

  • Computational complex...

Scopus© citazioni
13
Data di acquisizione
Jun 14, 2022
Vedi dettagli
Visualizzazioni
1
Data di acquisizione
Apr 19, 2024
Vedi dettagli
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